系統識別號 | U0002-2107201420054300 |
---|---|
DOI | 10.6846/TKU.2014.00838 |
論文名稱(中文) | 累積加總之模型檢查方法在腎臟癌、食道癌及胰臟癌資料應用 |
論文名稱(英文) | Model-Checking Techniques Based on Cumulative Sum with Application to Kidney, Esophageal, and Pancreatic Cancer |
第三語言論文名稱 | |
校院名稱 | 淡江大學 |
系所名稱(中文) | 統計學系應用統計學碩士班 |
系所名稱(英文) | Department of Statistics |
外國學位學校名稱 | |
外國學位學院名稱 | |
外國學位研究所名稱 | |
學年度 | 102 |
學期 | 2 |
出版年 | 103 |
研究生(中文) | 林靜儀 |
研究生(英文) | Ching-I Lin |
學號 | 601650251 |
學位類別 | 碩士 |
語言別 | 英文 |
第二語言別 | |
口試日期 | 2014-06-26 |
論文頁數 | 160頁 |
口試委員 |
指導教授
-
陳蔓樺
委員 - 林志娟 委員 - 張慶暉 |
關鍵字(中) |
累積加總 卜瓦松迴歸 羅吉斯迴歸 |
關鍵字(英) |
cumulative sum Poisson regression logistic regression |
第三語言關鍵字 | |
學科別分類 | |
中文摘要 |
對於模型配適是否恰當,通常作殘差圖來進行判斷,或者利用缺適性檢定(Goodness-of-fit)來檢驗模式。在本篇文章中,考慮採用累積加總的模型檢查方法(Model-checking techniques based on cumulative sum),此方法不僅可以檢驗模型是否假設錯誤或者存在自然變異,同時也可以提供當模型中的解釋變數之函數形式不適當時的解決方向。在取得分析資料方面,則考慮Surveillance Epidemiology and End Result (SEER) (www.seer. cancer.gov)資料庫中腎臟癌、食道癌及胰臟癌的資料,利用羅吉斯迴歸(logistic regression)與卜瓦松迴歸(Poisson regression)進行配適,並針對羅吉斯模型檢驗是否存在假設錯誤再加以修正。最後利用得到的模型探討在不同狀況下之病患死亡率。 |
英文摘要 |
Model-checking techniques (Biometrics 2002, Lin et al.) develops a statistical method in order to check misspecification or natural variation of different models. We focus at discussing the cumulative residuals by considering moving sum. We consider kidney, esophageal, and pancreatic cancer which from the Surveillance Epidemiology and End Result (SEER) (www.seer.cancer.gov) database released in 2012. Moreover, we provide the results of the logistic regression, the Poisson regression by this data. Each cancer is compared, both graphically and numerically. |
第三語言摘要 | |
論文目次 |
Directory Chapter 1 Introduction 1 1.1 Model-Checking Based on Cumulative Sum 2 1.2 Logistic Regression 6 1.3 Poisson Regression 7 1.4 Outlines 9 Chapter 2 Review the Cancer Data of SEER Database 10 2.1 Introduction to SEER Database 10 2.2 Literature Review of Kidney, Esophageal and Pancreatic Cancer 11 2.3 Descriptive Statistics and Inferences 20 2.4 Discussion among Kidney, Esophageal and Pancreatic Cancer 42 Chapter 3 Model-Checking Based on Cumulative Sum 46 3.1 Modeling 46 3.2 The Estimation of Parameters 71 3.3 Compare 78 3.4 Result 93 Chapter 4 Poisson Regression 95 4.1 Model 95 4.2 Mortality for Kidney, Esophageal and Pancreatic Cancer 107 4.3 Compare the Cancers 131 4.4 Result 134 Chapter 5 Discussion 135 5.1 Conclusions 135 5.2 Recommendation for Future Research 136 Reference 138 Appendix I 145 Appendix II 157 List of Figures Figure 1.1 The moving sum when the function form of is misspecified 5 Figure 2.1 Schematic diagram of kidney cancer staging 14 Figure 2.2 Structure of normal kidney 14 Figure 2.3 Schematic diagram of esophageal cancer staging 16 Figure 2.4 Schematic diagram of pancreatic cancer staging 19 Figure 2.5 Structure of normal pancreas 19 Figure 2.6 Pie chart of race for kidney cancer 21 Figure 2.7 Pie chart of sex for kidney cancer 22 Figure 2.8 Pie chart of tumor size for kidney cancer 23 Figure 2.9 Pie chart of extent (metastasis) for kidney cancer 24 Figure 2.10 Pie chart of vital status for kidney cancer 25 Figure 2.11 Bar chart of age for kidney cancer 26 Figure 2.12 Pie chart of race for esophageal cancer 28 Figure 2.13 Pie chart of sex for esophageal cancer 29 Figure 2.14 Pie chart of tumor size for esophageal cancer 30 Figure 2.15 Pie chart of extent (metastasis) for esophageal cancer 31 Figure 2.16 Pie chart of vital status for esophageal cancer 32 Figure 2.17 Bar chart of age for esophageal cancer 34 Figure 2.18 Pie chart of race for pancreatic cancer 36 Figure 2.19 Pie chart of sex for pancreatic cancer 37 Figure 2.20 Pie chart of tumor size for pancreatic cancer 38 Figure 2.21 Pie chart of extent (metastasis) for pancreatic cancer 39 Figure 2.22 Pie chart of vital status for pancreatic cancer 40 Figure 2.23 Bar chart of age for pancreatic cancer 41 Figure 3.1 Cumulative sum of the age in the sex for kidney cancer 47 Figure 3.2 Cumulative sum of predicted value in the sex for kidney cancer 48 Figure 3.3 Cumulative sum of the age in the tumor size for kidney cancer 49 Figure 3.4 Moving sum of the age in the tumor size for kidney cancer 49 Figure 3.5 Cumulative sum of the age with the revise form in the tumor size for kidney cancer 50 Figure 3.6 Cumulative sum of predicted value with the revise form in the tumor size for kidney cancer 50 Figure 3.7 Cumulative sum of the age in the extent (metastasis) for kidney cancer 51 Figure 3.8 Moving sum of the age in the extent (metastasis) for kidney cancer 52 Figure 3.9 Cumulative sum of the age with the revise form in the extent (metastasis) for kidney cancer 52 Figure 3.10 Cumulative sum of predicted value with the revise form in the extent (metastasis) for kidney cancer 53 Figure 3.11 Residual plots for female esophageal cancer 56 Figure 3.12 Residual plots for male for esophageal cancer 57 Figure 3.13 Residual plots for male for esophageal cancer with the revise form 57 Figure 3.14 Cumulative sum of the age in the tumor size and the extent (metastasis) for esophageal cancer 58 Figure 3.15 Moving sum of the age in the tumor size and the extent (metastasis) for esophageal cancer 59 Figure 3.16 Cumulative sum of the age with the revise form in the tumor size and the extent (metastasis) for esophageal cancer 60 Figure 3.17 Cumulative sum of predicted value with the revise form in the tumor size and the extent (metastasis) for esophageal cancer 61 Figure 3.18 Cumulative sum of the age in the tumor size for pancreatic cancer 64 Figure 3.19 Cumulative sum of predicted value in the tumor size for pancreatic cancer 65 Figure 3.20 Cumulative sum of the age in the sex and the extent (metastasis) for pancreatic cancer 66 Figure 3.21 Moving sum of the age in the sex and the extent (metastasis) for pancreatic cancer 67 Figure 3.22 Cumulative sum of the age with the revise form in the sex and the extent (metastasis) for pancreatic cancer 68 Figure 3.23 Cumulative sum of predicted value with the revise form in the sex and the extent (metastasis) for pancreatic cancer 69 Figure 3.24 The mortality rate of the sex for kidney cancer 79 Figure 3.25 The mortality rate of the tumor size for kidney cancer 79 Figure 3.26 The mortality rate of the extent (metastasis) for kidney cancer 80 Figure 3.27 The mortality rate of the tumor size for kidney cancer 81 Figure 3.28 The mortality rate of the extent (metastasis) for kidney cancer 81 Figure 3.29 The mortality rate of the sex for kidney cancer 82 Figure 3.30 The mortality rate of the sex for kidney cancer 82 Figure 3.31 The mortality rate of the sex for esophageal cancer 83 Figure 3.32 The mortality rate of the tumor size for esophageal cancer 83 Figure 3.33 The mortality rate of the extent (metastasis) for esophageal cancer 84 Figure 3.34 The mortality rate of the tumor size for esophageal cancer 85 Figure 3.35 The mortality rate of the extent (metastasis) for esophageal cancer 85 Figure 3.36 The mortality rate of the sex for esophageal cancer 86 Figure 3.37 The mortality rate of the sex for esophageal cancer 86 Figure 3.38 The mortality rate of the sex for pancreatic cancer 87 Figure 3.39 The mortality rate of the tumor size for pancreatic cancer 87 Figure 3.40 The mortality rate of the extent (metastasis) for pancreatic cancer 88 Figure 3.41 The mortality rate of the tumor size for pancreatic cancer 89 Figure 3.42 The mortality rate of the extent (metastasis) for pancreatic cancer 89 Figure 3.43 The mortality rate of the sex for pancreatic cancer 90 Figure 3.44 The mortality rate of the sex for pancreatic cancer 90 Figure 3.45 The mortality rate of the sex for each cancer 91 Figure 3.46 The mortality rate of the tumor size for each cancer 92 Figure 3.47 The mortality rate of the extent (metastasis) for each cancer 93 Figure 4.1 Mortality of the sex under different ages for kidney cancer 109 Figure 4.2 Mortality of the tumor size under different ages for kidney cancer 109 Figure 4.3 Mortality of the extent (metastasis) under different ages for kidney cancer 110 Figure 4.4 Mortality for female kidney cancer data 111 Figure 4.5 Mortality for male kidney cancer data 112 Figure 4.6 Mortality of sex under different tumor size for kidney cancer 113 Figure 4.7 Mortality of sex under different extent (metastasis) for kidney cancer 114 Figure 4.8 Mortality of the sex under different ages for esophageal cancer 116 Figure 4.9 Mortality of the tumor size under different ages for esophageal cancer 116 Figure 4.10 Mortality of the extent (metastasis) under different ages for esophageal cancer 117 Figure 4.11 Mortality for female esophageal cancer data 119 Figure 4.12 Mortality for male esophageal cancer data 120 Figure 4.13 Mortality of sex under different tumor size for esophageal cancer 121 Figure 4.14 Mortality of sex under different extent (metastasis) for esophageal cancer 122 Figure 4.15 Mortality of the sex under different ages for pancreatic cancer 124 Figure 4.16 Mortality of the tumor size under different ages for pancreatic cancer 125 Figure 4.17 Mortality of the extent (metastasis) under different ages for pancreatic cancer 125 Figure 4.18 Mortality for female pancreatic cancer data 127 Figure 4.19 Mortality for male pancreatic cancer data 128 Figure 4.20 Mortality of sex under different tumor size for pancreatic cancer 129 Figure 4.21 Mortality of sex under different extent (metastasis) for pancreatic cancer 130 Figure 4.22 Mortality of the sex for each cancer 132 Figure 4.23 Mortality of the tumor size for each cancer 133 Figure 4.24 Mortality of the extent (metastasis) for each cancer 133 Figure I.1 Residual plots for female small tumor under kidney cancer 145 Figure I.2 Residual plots for female large tumor under kidney cancer 145 Figure I.3 Residual plots for female metastasis not occurring under kidney cancer 145 Figure I.4 Residual plots for female metastasis occurring under kidney cancer 146 Figure I.5 Residual plots for male small tumors under kidney cancer 147 Figure I.6 Residual plots for male large tumor under kidney cancer 147 Figure I.7 Residual plots for male metastasis not occurring under kidney cancer 148 Figure I.8 Residual plots for male metastasis occurring under kidney cancer 149 Figure I.9 Residual plots for female small tumors under esophageal cancer 149 Figure I.10 Residual plots for female large tumors under esophageal cancer 149 Figure I.11 Residual plots for female metastasis not occurring under esophageal cancer 149 Figure I.12 Residual plots for female metastasis occurring under esophageal cancer 150 Figure I.13 Residual plots for male small tumor under esophageal cancer 151 Figure I.14 Residual plots for male large tumor under esophageal cancer 151 Figure I.15 Residual plots for male metastasis not occurring under esophageal cancer 152 Figure I.16 Residual plots for male metastasis occurring under esophageal cancer 153 Figure I.17 Residual plots for female small tumors under pancreatic cancer 153 Figure I.18Residual plots for female large tumors under pancreatic cancer 153 Figure I.19 Residual plots for female metastasis not occurring 154 Figure I.20 Residual plots for female metastasis occurring 155 Figure I.21 Residual plots for male small tumors under pancreatic cancer 155 Figure I.22 Residual plots for male large tumor under pancreatic cancer 155 Figure I.23 Residual plots for male metastasis not occurring under pancreatic cancer 156 Figure I.24 Residual plots for male metastasis occurring under pancreatic cancer 156 List of Tables Table 2.1 Kidney cancer staging 13 Table 2.2 Esophageal cancer staging 16 Table 2.3 Pancreatic cancer staging 18 Table 2.4 Frequency distribution of race for kidney cancer 21 Table 2.5 Frequency distribution of sex for kidney cancer 22 Table 2.6 Frequency distribution of tumor size for kidney cancer 23 Table 2.7 Frequency distribution of extent (metastasis) for kidney cancer 24 Table 2.8 Frequency distribution of vital status for kidney cancer 25 Table 2.9 Frequency distribution of age for kidney cancer 26 Table 2.10 Test for the proportion between female data and male data 27 Table 2.11 Frequency distribution of race for esophageal cancer 28 Table 2.12 Frequency distribution of sex for esophageal cancer 29 Table 2.13 Frequency distribution of tumor size for esophageal cancer 30 Table 2.14 Frequency distribution of extent (metastasis) for esophageal cancer 31 Table 2.15 Frequency distribution of vital status for esophageal cancer 32 Table 2.16 Frequency distribution of age for esophageal cancer 33 Table 2.17 Test for the proportion in female data and male data 34 Table 2.18 Frequency distribution of race for pancreatic cancer 35 Table 2.19 Frequency distribution of sex for pancreatic cancer 36 Table 2.20 Frequency distribution of tumor size for pancreatic cancer 37 Table 2.21 Frequency distribution of extent (metastasis) for pancreatic cancer 38 Table 2.22 Frequency distribution of vital status for pancreatic cancer 40 Table 2.23 Frequency distribution of age for pancreatic cancer 41 Table 2.24 Test for the proportion in female data and male data 42 Table 2.25 Test for the average age for three cancers with 43 Table 2.26 Multiple comparisons of the average age between two cancers 44 Table 2.27 Test for the proportion of male in three cancer data 44 Table 2.28 Test for the proportion of dead in three cancer data 45 Table 3.1 The cumulative residuals results under the sex, tumor size, and extent (metastasis) for kidney cancer 53 Table 3.2 The cumulative residuals results under the sex with tumor size and extent (metastasis) for kidney cancer 54 Table 3.3 The cumulative residuals results under the sex, tumor size, and extent (metastasis) for esophageal cancer 61 Table 3.4 The cumulative residuals results under the sex with tumor size and extent (metastasis) for esophageal cancer 62 Table 3.5 The cumulative residuals results under the sex, tumor size, and extent (metastasis) for pancreatic cancer 69 Table 3.6 The cumulative residuals results under the sex with tumor size and extent (metastasis) for pancreatic cancer 70 Table 3.7 The parameter estimation for each level of sex, tumor size and extent (metastasis) for kidney cancer 72 Table 3.8 The parameter estimation for each level of tumor size and extent (metastasis) in female data and male data for kidney cancer 73 Table 3.9 The parameter estimation for each level of sex, tumor size and extent (metastasis) for esophageal cancer 74 Table 3.10 The parameter estimation for each level of tumor size and extent (metastasis) in female data and male data for esophageal cancer 75 Table 3.11 The parameter estimation for each level of sex, tumor size and extent (metastasis) for pancreatic cancer 76 Table 3.12 The parameter estimation for each level of tumor size and extent (metastasis) in female data and male data for pancreatic cancer 77 Table 4.1 Parameter estimation of and for kidney cancer 96 Table 4.2 Parameter estimation of and in female data and male data for kidney cancer 98 Table 4.3 Parameter estimation of and for esophageal cancer 100 Table 4.4 Parameter estimation of and in female data and male data for esophageal cancer 102 Table 4.5 Parameter estimation of and for pancreatic cancer 104 Table 4.6 Parameter estimation of and in female data and male data for pancreatic cancer 106 Table 4.7 Mortality of sex, tumor size, and extent (metastasis) under different ages for kidney cancer 108 Table 4.8 Mortality of tumor size, extent (metastasis) in female data and male data under different ages for kidney cancer 110 Table 4.9 Mortality of sex, tumor size, and extent (metastasis) under different ages for esophageal cancer 115 Table 4.10 Mortality of tumor size, extent (metastasis) in female data and male data under different ages for esophageal cancer 118 Table 4.11 Mortality of sex, tumor size, and extent (metastasis) under different ages for pancreatic cancer 123 Table 4.12 Mortality of tumor size, extent (metastasis) in female data and male data under different ages for pancreatic cancer 126 Table II.1 The number of dead and total for sex, tumor size, extent (metastasis) 157 Table II.2 The number of dead and total for female data for kidney cancer 157 Table II.3 The number of dead and total for male data for kidney cancer 157 Table II.4 The number of dead and total for sex, tumor size, extent (metastasis) 158 Table II.5 The number of dead and total for female data for esophageal cancer 158 Table II.6 The number of dead and total for male data for esophageal cancer 159 Table II.7 The number of dead and total for sex, tumor size, extent (metastasis) 159 Table II.8 The number of dead and total for female data for pancreatic cancer 160 Table II.9 The number of dead and total for male data for pancreatic cancer 160 |
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